commit-graph: ignore duplicates when merging layers

Thomas reported [1] that a "git fetch" command was failing with an error
saying "unexpected duplicate commit id". The root cause is that they had
fetch.writeCommitGraph enabled which generates commit-graph chains, and
this instance was merging two layers that both contained the same commit
ID.

[1] https://lore.kernel.org/git/55f8f00c-a61c-67d4-889e-a9501c596c39@virtuell-zuhause.de/

The initial assumption is that Git would not write a commit ID into a
commit-graph layer if it already exists in a lower commit-graph layer.
Somehow, this specific case did get into that situation, leading to this
error.

While unexpected, this isn't actually invalid (as long as the two layers
agree on the metadata for the commit). When we parse a commit that does
not have a graph_pos in the commit_graph_data_slab, we use binary search
in the commit-graph layers to find the commit and set graph_pos. That
position is never used again in this case. However, when we parse a
commit from the commit-graph file, we load its parents from the
commit-graph and assign graph_pos at that point. If those parents were
already parsed from the commit-graph, then nothing needs to be done.
Otherwise, this graph_pos is a valid position in the commit-graph so we
can parse the parents, when necessary.

Thus, this die() is too aggressive. The easiest thing to do would be to
ignore the duplicates.

If we only ignore the duplicates, then we will produce a commit-graph
that has identical commit IDs listed in adjacent positions. This excess
data will never be removed from the commit-graph, which could cascade
into significantly bloated file sizes.

Thankfully, we can collapse the list to erase the duplicate commit
pointers. This allows us to get the end result we want without extra
memory costs and minimal CPU time.

The root cause is due to disabling core.commitGraph, which prevents
parsing commits from the lower layers during a 'git commit-graph write
--split' command. Since we use the 'graph_pos' value to determine
whether a commit is in a lower layer, we never discover that those
commits are already in the commit-graph chain and add them to the top
layer. This layer is then merged down, creating duplicates.

The test added in t5324-split-commit-graph.sh fails without this change.
However, we still have not completely removed the need for this
duplicate check. That will come in a follow-up change.

Reported-by: Thomas Braun <thomas.braun@virtuell-zuhause.de>
Helped-by: Taylor Blau <me@ttaylorr.com>
Co-authored-by: Jeff King <peff@peff.net>
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
2 files changed
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README.md

Build status

Git - fast, scalable, distributed revision control system

Git is a fast, scalable, distributed revision control system with an unusually rich command set that provides both high-level operations and full access to internals.

Git is an Open Source project covered by the GNU General Public License version 2 (some parts of it are under different licenses, compatible with the GPLv2). It was originally written by Linus Torvalds with help of a group of hackers around the net.

Please read the file INSTALL for installation instructions.

Many Git online resources are accessible from https://git-scm.com/ including full documentation and Git related tools.

See Documentation/gittutorial.txt to get started, then see Documentation/giteveryday.txt for a useful minimum set of commands, and Documentation/git-<commandname>.txt for documentation of each command. If git has been correctly installed, then the tutorial can also be read with man gittutorial or git help tutorial, and the documentation of each command with man git-<commandname> or git help <commandname>.

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The user discussion and development of Git take place on the Git mailing list -- everyone is welcome to post bug reports, feature requests, comments and patches to git@vger.kernel.org (read Documentation/SubmittingPatches for instructions on patch submission). To subscribe to the list, send an email with just “subscribe git” in the body to majordomo@vger.kernel.org. The mailing list archives are available at https://lore.kernel.org/git/, http://marc.info/?l=git and other archival sites.

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The maintainer frequently sends the “What's cooking” reports that list the current status of various development topics to the mailing list. The discussion following them give a good reference for project status, development direction and remaining tasks.

The name “git” was given by Linus Torvalds when he wrote the very first version. He described the tool as “the stupid content tracker” and the name as (depending on your mood):

  • random three-letter combination that is pronounceable, and not actually used by any common UNIX command. The fact that it is a mispronunciation of “get” may or may not be relevant.
  • stupid. contemptible and despicable. simple. Take your pick from the dictionary of slang.
  • “global information tracker”: you're in a good mood, and it actually works for you. Angels sing, and a light suddenly fills the room.
  • “goddamn idiotic truckload of sh*t”: when it breaks